Gene Expression Omnibus (GEO) accession

ID geo_accession

DatatypeNot PIIidentifierDraft

This record is a draft: it has not been reviewed yet and may be incomplete or wrong. Do not rely on it for compliance decisions. Help improve it (see CONTRIBUTING.md).

Accession of a record in the Gene Expression Omnibus, the NCBI repository of gene expression and other functional genomics data. The prefix gives the kind of record: GSE for a series (usually one study), GSM for a sample, GPL for a platform and GDS for a curated dataset; digits follow.

Categories: Scientific
Countries: Global (not tied to a country)
Languages: Common to most languages
Bioregistry: geo
Quality: 85/100 · missing: translation, detector coverage
Metacrafter rules: no detection rule yet
Supported by tools: no tool record lists this type yet

Regular expression

^G(PL|SM|SE|DS)\d+$

Python re syntax.

Examples

Value	Description
GSE2034	Series "Breast cancer relapse free survival"
GDS1234	Curated dataset; Bioregistry example
GSE-2034 invalid	Hyphen between prefix and number

Sources

doc: https://www.ncbi.nlm.nih.gov/geo/
other: https://bioregistry.io/registry/geo

Use this record

Page URL: http://registry.apicrafter.io/datatype/geo_accession
JSON: API v1 · legacy shape (used by metacrafter) · Markdown (for LLMs)
Improve it: edit data/datatypes/any/science/geo_accession.yaml on GitHub