INSDC sequence accession (GenBank, ENA, DDBJ)
ID insdc_accession
This record is a draft: it has not been reviewed yet and may be incomplete or wrong. Do not rely on it for compliance decisions. Help improve it (see CONTRIBUTING.md).
Accession number of a sequence record in the databases of the International Nucleotide Sequence Database Collaboration: GenBank at NCBI, the European Nucleotide Archive (ENA) at EMBL-EBI and DDBJ. The three exchange their records and share one accession space. Older nucleotide records have one letter and five digits or two letters and six digits; bulk records such as whole-genome shotgun contigs have four to six letters and eight to ten digits; coding sequence (protein) records have three letters and five digits, as in AAA35559. A version such as .1 may follow. RefSeq, read archive, BioSample and BioProject accessions are separate datatypes.
- Categories
- Scientific
- Countries
- Global (not tied to a country)
- Languages
- Common to most languages
- Bioregistry
insdc- Quality
- 85/100 · missing: translation, detector coverage
- Metacrafter rules
- no detection rule yet
- Supported by tools
- no tool record lists this type yet
Regular expression
^([A-Z]\d{5}|[A-Z]{2}\d{6}|[A-Z]{4,6}\d{8,10}|[A-J][A-Z]{2}\d{5})(\.\d+)?$Python re syntax.
Examples
| Value | Description |
|---|---|
| X58356 | Nicotiana sylvestris gene for a 33 kDa chloroplast ribonucleoprotein; Bioregistry example |
| X58356.1 | The same record with its version |
| NM_000546 invalid | RefSeq accession, not an INSDC one |
Sources
Use this record
- Page URL:
http://registry.apicrafter.io/datatype/insdc_accession - JSON: API v1 · legacy shape (used by metacrafter) · Markdown (for LLMs)
- Improve it: edit
data/datatypes/any/science/insdc_accession.yamlon GitHub