Pfam family accession
ID pfam_id
DatatypeNot PIIidentifierDraft
This record is a draft: it has not been reviewed yet and may be incomplete or wrong. Do not rely on it for compliance decisions. Help improve it (see CONTRIBUTING.md).
Accession of a protein family or domain in Pfam, a collection of protein families described by multiple sequence alignments and hidden Markov models, now maintained within InterPro at EMBL-EBI. It is PF and five digits. Pfam clans, which group related families, have CL accessions and are not covered.
- Categories
- Scientific
- Countries
- Global (not tied to a country)
- Languages
- Common to most languages
- Bioregistry
pfam- Wikidata
- P3519
- Quality
- 85/100 · missing: translation, detector coverage
- Metacrafter rules
- no detection rule yet
- Supported by tools
- no tool record lists this type yet
Regular expression
^PF\d{5}$Python re syntax.
Examples
| Value | Description |
|---|---|
| PF00069 | Protein kinase domain |
| PF11779 | Small subunit of serine palmitoyltransferase-like; Bioregistry example |
| CL0192 invalid | Pfam clan accession, not a family |
Sources
- doc: https://www.ebi.ac.uk/interpro/
- other: https://bioregistry.io/registry/pfam
- wikidata: https://www.wikidata.org/wiki/Property:P3519
Use this record
- Page URL:
http://registry.apicrafter.io/datatype/pfam_id - JSON: API v1 · legacy shape (used by metacrafter) · Markdown (for LLMs)
- Improve it: edit
data/datatypes/any/science/pfam_id.yamlon GitHub