Sequence Ontology (SO) term ID
ID sequence_ontology_id
DatatypeNot PIIcategoricalDraft
This record is a draft: it has not been reviewed yet and may be incomplete or wrong. Do not rely on it for compliance decisions. Help improve it (see CONTRIBUTING.md).
Identifier of a term in the Sequence Ontology, the controlled vocabulary for the parts of genome annotations and for sequence variants, such as missense_variant. It is SO: and seven digits; OBO PURLs write SO_ instead.
- Categories
- Scientific
- Countries
- Global (not tied to a country)
- Languages
- Common to most languages
- Bioregistry
so- Quality
- 85/100 · missing: translation, detector coverage
- Metacrafter rules
- no detection rule yet
- Supported by tools
- no tool record lists this type yet
Regular expression
^SO[:_]\d{7}$Python re syntax.
Examples
| Value | Description |
|---|---|
| SO:0001583 | missense_variant |
| SO:0001157 | DMv4_motif; Bioregistry example |
| SO:1583 invalid | Not padded to seven digits |
Sources
Use this record
- Page URL:
http://registry.apicrafter.io/datatype/sequence_ontology_id - JSON: API v1 · legacy shape (used by metacrafter) · Markdown (for LLMs)
- Improve it: edit
data/datatypes/any/science/sequence_ontology_id.yamlon GitHub